logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000268_13|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000268_02295
Glycine betaine transporter BetL
TC 4254 5762 + 2.A.15.2.3
MGYG000000268_02296
Inner membrane protein YqcE
TC 5897 7186 + 2.A.1.52.2
MGYG000000268_02297
Cystathionine beta-lyase PatB
STP 7234 8412 + Aminotran_1_2
MGYG000000268_02298
Beta-N-acetylglucosaminidase/beta-glucosidase
CAZyme 8783 10471 + GH3
MGYG000000268_02299
hypothetical protein
CAZyme 10672 13467 + GH78| CBM67
MGYG000000268_02300
Thermostable beta-glucosidase B
CAZyme 13566 15824 + GH3
MGYG000000268_02301
HTH-type transcriptional activator RhaR
TF 15887 16939 - HTH_AraC
MGYG000000268_02302
Ribose import ATP-binding protein RbsA
TC 17126 18628 + 3.A.1.2.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is beta-glucan

Protein ID eCAMI subfam CAZyme substrate
MGYG000000268_02298 GH3_e68|3.2.1.52|3.2.1.21|2.4.1.- peptidoglycan|chitin|beta-glucan
MGYG000000268_02299 GH78_e47|3.2.1.40|3.1.1.73 alpha-rhamnoside
MGYG000000268_02300 GH3_e93|3.2.1.45|3.2.1.21|3.2.1.- hostglycan|beta-glucan

Substrate predicted by dbCAN-PUL is xyloglucan download this fig


Genomic location